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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890663.1_cds_XP_016445400.1_40363
CDS Infomation

[gene=LOC107770592] [db_xref=GeneID:107770592] [protein=probable glucan endo-1,3-beta-glucosidase A6] [protein_id=XP_016445400.1] [location=join(36651..36711,36801..38099,38607..38644)] [gbkey=CDS]
Sequence

ATGATGGGTTGTTTATCTACTTTACTTCTACTATCTTTCCTTGCTTTTGCTTCTTTCTCC
GGTGCAGAAATCTCATCTAAGGTAGGAATATGCTACGGACAACTTGGGAACAACCTCCCT
ATACCAACAAAATCAGTTGACTTAATCAATGGTCTCAAAGCCAATAGAGTCAAGATCTAC
GATGCAAACCCAGAAATCCTTAAAGCCTTCAAAGGCACAAAACTTCAACTTTCAGTCATG
GTCCCAAATGAGCTTATCAACAACATCTCTACAAATCAAGACTTAGCAGATCAATGGGTC
AAAACCAATGTTGTACCATTTTACCCCGACACTATGATCCGTTACGTCCTTGTTGGAAAC
GAAATCCTAAGTAGCCCACCCAACACCACTTGGTTCAACCTTGTACCTGCCATACGCAAA
ATCAGATACGCTGTCAAAAAATTTGGTCTCGGAAAAATTAAAGTTGGTACCCCATTAGCT
ATTGATATGCTTGAATCTTCTTTCCCACCTTCTAATGGTACATTTAGGTCCGACATTTCG
GAAAAAGTTATGAAACCCTTGTTACATTTTTTGAACCGAACCAAATCATTCTTTTTCATA
GATGTTTATCCTTATTTTGCTTGGGCAGCTCAACCTACAGTAATTAATCTTGACTATGCT
TTGTTAGAGTCCAAGAATATTACCGTTACGGATCCGGGTTCGGGTTTAACCTATACGAAT
TTATTGGACCAAATGATTGATGCAGTGTATTTCGCTATGAAGAGAGTGGGCTACCCGGAT
GTTCGGTTATTTATTGCAGAAACGGGTTGGCCCAATGCTGGTAATGTAGACCAAATTGGA
GCGAACATCTATAATGCAGCAACGTACAACAGGAACGTGATTAAAAAGTTTACAGCTAAG
CCACCTGTGGGAACGCCAGCAAAACCAGGAGTTGTCGTGCCGACATTATTGTTTGCTTTG
TACAACGAGAATGAGAAACCGGGTCCGGGTACGGAACGGCATTTCGGGTTACTGTATCCG
AACGGGACGAATATATACGGGATTGACTTGTCTGGAAAGACGTCGTTGTCGGAATATGAA
CCATTGCCAAGGCCGAAGAACAATGAGCCGTACAAGGGGAAAATCTGGTGCGTTGTTGGG
AGAAAAGCGAGTGTAACGGAAGTGAGTGGAGCATTGGCATATGCATGTGGGCAGGGTAAT
CGGACCTGTGATGAGATCCGACCCGGTGGGAAATGTTACAAACCGAATTCTTTGGTGTTA
CATGCGAATTACGCGTTCAGTTCTTATTGGGCTCAGTTTAAGTCAGCTGGAGGAACTTGT
TATTTCAATGGGCTTGCTATTCCGACCAAAAGTGATCCAAGTTATGGAGCTTGCAAGTTC
CCAAGCGTCACAATTTGA

Peptide Sequence

PEP ID

XP_016445400.1
PEP Infomation

PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana tabacum]
Sequence

MMGCLSTLLLLSFLAFASFSGAEISSKVGICYGQLGNNLPIPTKSVDLINGLKANRVKIY
DANPEILKAFKGTKLQLSVMVPNELINNISTNQDLADQWVKTNVVPFYPDTMIRYVLVGN
EILSSPPNTTWFNLVPAIRKIRYAVKKFGLGKIKVGTPLAIDMLESSFPPSNGTFRSDIS
EKVMKPLLHFLNRTKSFFFIDVYPYFAWAAQPTVINLDYALLESKNITVTDPGSGLTYTN
LLDQMIDAVYFAMKRVGYPDVRLFIAETGWPNAGNVDQIGANIYNAATYNRNVIKKFTAK
PPVGTPAKPGVVVPTLLFALYNENEKPGPGTERHFGLLYPNGTNIYGIDLSGKTSLSEYE
PLPRPKNNEPYKGKIWCVVGRKASVTEVSGALAYACGQGNRTCDEIRPGGKCYKPNSLVL
HANYAFSSYWAQFKSAGGTCYFNGLAIPTKSDPSYGACKFPSVTI

Transcript Sequence

Gene sequence data has not been registered.